C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12267
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121609 Gm12267-001 ENSMUSG00000084249 10090 - 11:60449210-60449970 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000121609
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000121609 0.073±0.03 0.143±0.01 0.090±0.03 0.058±0.02 0.113±0.01 0.121±0.00 0.052±0.00 0.096±0.06 0.062±0.00 0.307±0.12 0.074±0.04 0.588±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DZ CIL_0000DZ_0002 CGP 11:60400626-60450927
CIL_0000E0 CIL_0000E0_0002 CGP 11:60417145-60468754

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316084 RPS4X-001 protein_coding Homo_sapiens 0 599
ENST00000373626 RPS4X-002 protein_coding Homo_sapiens 2e-32 143
ENST00000398541 RPS4XP3-001 processed_pseudogene Homo_sapiens 0 206
ENST00000402039 RPS4XP8-001 processed_pseudogene Homo_sapiens 0 379
ENST00000405151 RPS4XP9-001 processed_pseudogene Homo_sapiens 0 411
ENST00000406274 RPS4XP7-001 processed_pseudogene Homo_sapiens 0 505
ENST00000419038 RPS4XP5-001 transcribed_processed_pseudogene Homo_sapiens 0 424
ENST00000446897 RPS4XP11-001 processed_pseudogene Homo_sapiens 0 510
ENST00000449995 RPS4XP5-002 processed_transcript Homo_sapiens 0 396
ENST00000458402 RPS4XP2-001 processed_pseudogene Homo_sapiens 0 556
ENST00000465034 RPS4XP10-001 processed_pseudogene Homo_sapiens 0 351
ENST00000477670 RPS4XP6-001 processed_pseudogene Homo_sapiens 0 523
ENST00000479057 RPS4XP17-001 processed_pseudogene Homo_sapiens 0 477
ENST00000480755 RPS4XP22-001 processed_pseudogene Homo_sapiens 0 490
ENST00000486733 RPS4X-003 processed_transcript Homo_sapiens 0 411
ENST00000493072 RPS4XP14-001 processed_pseudogene Homo_sapiens 0 414
ENST00000505751 RPS4XP20-001 processed_pseudogene Homo_sapiens 0 385
ENST00000508013 RP11-697N18.1-001 unprocessed_pseudogene Homo_sapiens 0 477

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