C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptonemal complex central element protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402753 SYCE3-001 ENSG00000217442 9606 - 22:50551197-50556432 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLiverOvaryPlacentaENST00000402753
Transcript ID Adrenal Breast Liver Ovary Placenta
ENST00000402753 0.053±0.00 0.133±0.00 0.149±0.00 0.460±0.00 0.434±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MI CIL_0003MI_0001 CGP 22:50548033-50562905
CIL_00028I CIL_00028I_0001 CGP 22:50551112-50578465

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000801 ISS central element
GO:0005634 ISS nucleus
GO:0005694 ISS chromosome
GO:0007130 ISS synaptonemal complex assembly
GO:0007131 ISS reciprocal meiotic recombination
GO:0007283 ISS spermatogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167959 Syce3-001 protein_coding Mus_musculus 0 311
ENSMUST00000109314 Syce3-002 protein_coding Mus_musculus 0 311

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