C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 35
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404338 ARHGAP35-001 ENSG00000160007 9606 + 19:46918676-47005077 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000404338
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000404338 7.838±0.00 7.421±0.00 15.000±0.00 11.447±0.00 10.500±0.00 7.622±0.00 8.656±0.00 7.148±0.00 2.673±0.00 4.721±0.00 6.274±4.61 1.804±0.53 10.529±1.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0001 VISTA 19:46806794-47408636

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IEA neural tube closure
GO:0003677 IEA DNA binding
GO:0003714 TAS transcription corepressor activity
GO:0005100 TAS Rho GTPase activator activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IC nucleus
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0007165 IEA signal transduction
GO:0007264 TAS:IEA small GTPase mediated signal transduction
GO:0007411 TAS axon guidance
GO:0008360 IEA regulation of cell shape
GO:0010976 IEA positive regulation of neuron projection development
GO:0015629 IEA actin cytoskeleton
GO:0030900 IEA forebrain development
GO:0032321 TAS positive regulation of Rho GTPase activity
GO:0035024 IEA negative regulation of Rho protein signal transduction
GO:0043010 IEA camera-type eye development
GO:0043116 IEA negative regulation of vascular permeability
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171937 Arhgap35-201 protein_coding Mus_musculus 0 5781
ENSMUST00000075845 Arhgap35-001 protein_coding Mus_musculus 0 5781
ENSMUST00000188133 Arhgap35-002 protein_coding Mus_musculus 0 207

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