C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404372 RP1-99E18.2-001 ENSG00000218996 9606 + 6:150934968-150935566 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverLungOvaryPlacentaTestisENST00000404372
Transcript ID Adipose Adrenal Brain Breast Heart Liver Lung Ovary Placenta Testis
ENST00000404372 0.072±0.00 0.073±0.00 0.145±0.00 0.292±0.00 0.043±0.00 0.515±0.00 0.566±0.28 0.511±0.50 0.107±0.04 0.135±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ED CIL_0005ED_0001 CGP 6:150599863-151101887
CIL_0005EE CIL_0005EE_0001 CGP 6:150865549-151358557

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146905 Arl4a-001 protein_coding Mus_musculus 0 822
ENSMUST00000101472 Arl4a-002 protein_coding Mus_musculus 0 822
ENSMUST00000144910 Arl4a-004 nonsense_mediated_decay Mus_musculus 0 265
ENSMUST00000136441 Arl4a-003 nonsense_mediated_decay Mus_musculus 0 265

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