C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005EE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120254-ENSG00000131016 CGP 9606 6:150865549-151358557
GeneTranscriptPositionBiotype
ENSG00000120254 (MTHFD1L)
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 		ENST00000367307 (MTHFD1L-012) 150865716-150899021 protein_coding
ENST00000367308 (MTHFD1L-008) 150865944-150926153 protein_coding
ENST00000367321 (MTHFD1L-003) 150865549-151101887 protein_coding
ENST00000420192 (MTHFD1L-007) 151014880-151022355 protein_coding
ENST00000421497 (MTHFD1L-005) 150905670-150912948 processed_transcript
ENST00000423867 (MTHFD1L-009) 150866557-150887873 protein_coding
ENST00000441122 (MTHFD1L-004) 150866506-150936915 nonsense_mediated_decay
ENST00000450635 (MTHFD1L-002) 151036974-151042058 protein_coding
ENST00000453602 (MTHFD1L-001) 151034532-151042064 protein_coding
ENST00000478643 (MTHFD1L-006) 150971948-151009958 processed_transcript
ENST00000611279 (MTHFD1L-201) 150865679-151101885 protein_coding
ENST00000618312 (MTHFD1L-202) 150866333-151101885 protein_coding
ENSG00000131016 (AKAP12)
A kinase (PRKA) anchor protein 12 		ENST00000253332 (AKAP12-001) 151240374-151356773 protein_coding
ENST00000354675 (AKAP12-002) 151325688-151356773 protein_coding
ENST00000359755 (AKAP12-201) 151341686-151356773 protein_coding
ENST00000402676 (AKAP12-202) 151239999-151358557 protein_coding
ENST00000490177 (AKAP12-003) 151341702-151349186 processed_transcript
ENSG00000202119 (RNU6-302P)
RNA, U6 small nuclear 302, pseudogene 		ENST00000365249 (RNU6-302P-201) 150939222-150939328 snRNA
ENSG00000213087 (RP11-613F7.1)
 ENST00000440335 (RP11-613F7.1-001) 151225550-151225947 processed_pseudogene
ENSG00000218996 (RP1-99E18.2)
 ENST00000404372 (RP1-99E18.2-001) 150934968-150935566 processed_pseudogene
ENSG00000219747 (RP1-292B18.1)
 ENST00000405720 (RP1-292B18.1-001) 151099529-151099933 processed_pseudogene
ENSG00000223039 (RN7SKP268)
RNA, 7SK small nuclear pseudogene 268 		ENST00000411107 (RN7SKP268-201) 151319635-151319950 misc_RNA
ENSG00000223598 (RP1-292B18.4)
 ENST00000415477 (RP1-292B18.4-001) 151088103-151228447 antisense
ENSG00000231883 (RP1-297M16.2)
 ENST00000431947 (RP1-297M16.2-001) 151196681-151197638 lincRNA
ENSG00000232290 (RP1-292B18.3)
 ENST00000445833 (RP1-292B18.3-001) 151054897-151056057 antisense
ENSG00000252431 (RNU6-1247P)
RNA, U6 small nuclear 1247, pseudogene 		ENST00000516622 (RNU6-1247P-201) 151280515-151280612 snRNA
ENSG00000252487 (RNY4P20)
RNA, Ro-associated Y4 pseudogene 20 		ENST00000516678 (RNY4P20-201) 151298841-151298933 misc_RNA
CIL_0005EE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040675-ENSMUSG00000038587 CGP 10090 10:3973118-4359468
GeneTranscriptPositionBiotype
ENSMUSG00000038587 (Akap12)
A kinase (PRKA) anchor protein (gravin) 12 		ENSMUST00000045730 (Akap12-201) 4266329-4359468 protein_coding
ENSMUSG00000040675 (Mthfd1l)
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 		ENSMUST00000043735 (Mthfd1l-002) 3973144-4156111 protein_coding
ENSMUST00000117291 (Mthfd1l-001) 3973118-4156111 protein_coding
ENSMUST00000120585 (Mthfd1l-003) 3973131-4167081 protein_coding
ENSMUST00000154517 (Mthfd1l-004) 4032280-4048951 processed_transcript
ENSMUSG00000065792 (Gm25515)
predicted gene, 25515 		ENSMUST00000083858 (Gm25515-201) 4104313-4104469 snRNA
ENSMUSG00000082247 (Gm16074)
predicted gene 16074 		ENSMUST00000119524 (Gm16074-001) 3992371-3992814 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005EE_0001ENSG00000120254ENST00000367307ENST00000367308ENST00000367321ENST00000420192ENST00000421497ENST00000423867ENST00000441122ENST00000450635ENST00000453602ENST00000478643ENST00000611279ENST00000618312ENSG00000131016ENST00000253332ENST00000354675ENST00000359755ENST00000402676ENST00000490177ENSG00000202119ENST00000365249ENSG00000213087ENST00000440335ENSG00000218996ENST00000404372ENSG00000219747ENST00000405720ENSG00000223039ENST00000411107ENSG00000223598ENST00000415477ENSG00000231883ENST00000431947ENSG00000232290ENST00000445833ENSG00000252431ENST00000516622ENSG00000252487ENST00000516678CIL_0005EE_0002ENSMUSG00000038587ENSMUST00000045730ENSMUSG00000040675ENSMUST00000043735ENSMUST00000117291ENSMUST00000120585ENSMUST00000154517ENSMUSG00000065792ENSMUST00000083858ENSMUSG00000082247ENSMUST00000119524
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005EE_0001ENSG00000120254ENST00000367307ENST00000367308ENST00000367321ENST00000423867ENST00000441122ENST00000453602ENST00000611279ENST00000618312ENSG00000131016ENST00000253332ENST00000354675ENST00000359755ENST00000402676ENSG00000202119ENST00000365249ENSG00000213087ENST00000440335ENSG00000218996ENST00000404372ENSG00000219747ENST00000405720ENSG00000223039ENST00000411107ENSG00000223598ENST00000415477ENSG00000231883ENST00000431947ENSG00000232290ENST00000445833ENSG00000252431ENST00000516622ENSG00000252487ENST00000516678CIL_0005EE_0002ENSMUSG00000038587ENSMUST00000045730ENSMUSG00000040675ENSMUST00000043735ENSMUST00000117291ENSMUST00000120585ENSMUST00000154517ENSMUSG00000065792ENSMUST00000083858ENSMUSG00000082247ENSMUST00000119524
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120254 ENST00000367307 3.316±0.00 5.115±0.00 N/A 1.919±0.00 N/A 2.408±0.00 N/A 2.018±0.00 0.676±0.00 13.312±0.00 N/A N/A 4.184±0.45 2.936±0.00
ENST00000367308 N/A N/A N/A N/A N/A N/A 0.465±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000367321 0.876±0.00 N/A N/A 2.137±0.00 1.527±0.93 3.032±0.00 N/A 0.625±0.00 N/A N/A N/A 6.482±3.08 2.343±0.00 1.570±0.00
ENST00000420192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423867 N/A N/A N/A N/A N/A N/A N/A N/A 1.099±0.00 N/A N/A N/A N/A N/A
ENST00000441122 N/A N/A 0.632±0.00 N/A 1.306±0.00 1.212±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.334±0.00 N/A N/A N/A
ENST00000478643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611279 N/A N/A N/A 0.359±0.00 N/A 0.465±0.00 0.227±0.15 2.546±0.00 0.198±0.00 13.538±0.00 0.242±0.00 16.950±0.00 5.324±0.00 3.240±0.00
ENST00000618312 2.794±0.00 5.954±0.00 0.301±0.00 0.989±0.05 1.243±0.00 N/A 0.122±0.09 0.431±0.00 0.821±0.00 0.490±0.00 N/A 9.269±5.00 5.333±0.56 2.563±0.00
ENSG00000131016 ENST00000253332 13.113±0.00 N/A 3.360±0.00 4.257±1.67 8.226±0.43 8.499±3.55 1.233±0.45 2.888±0.00 6.218±5.55 19.630±13.98 0.280±0.00 2.561±1.23 5.799±2.89 37.379±0.00
ENST00000354675 26.197±0.00 3.407±0.00 N/A N/A 1.923±0.00 14.595±11.10 0.772±0.34 0.834±0.00 1.521±0.00 1.376±0.00 1.199±0.00 5.746±3.10 5.057±0.00 N/A
ENST00000359755 10.391±0.00 4.194±0.00 N/A 9.292±0.00 14.457±0.00 14.054±0.00 1.978±0.00 5.319±0.00 N/A N/A 0.824±0.00 9.690±9.27 N/A 30.757±0.00
ENST00000402676 N/A N/A 1.738±0.00 3.571±0.93 4.396±0.00 N/A 0.974±0.33 0.832±0.00 7.443±0.00 2.781±0.00 N/A 7.101±3.16 3.174±0.00 N/A
ENST00000490177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000202119 ENST00000365249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.477±0.00 N/A N/A
ENSG00000213087 ENST00000440335 N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A 0.089±0.00 N/A 0.069±0.00
ENSG00000218996 ENST00000404372 0.072±0.00 0.073±0.00 N/A 0.145±0.00 0.292±0.00 N/A 0.043±0.00 N/A 0.515±0.00 0.566±0.28 N/A 0.511±0.50 0.107±0.04 0.135±0.09
ENSG00000219747 ENST00000405720 0.255±0.00 0.092±0.00 N/A 0.194±0.00 0.722±0.48 0.088±0.00 0.122±0.00 0.094±0.00 0.042±0.00 0.635±0.00 0.556±0.00 2.211±2.16 0.577±0.44 0.287±0.16
ENSG00000223039 ENST00000411107 0.285±0.00 N/A N/A 0.085±0.00 0.159±0.00 0.802±0.00 N/A N/A N/A 1.046±0.26 N/A 1.613±0.19 N/A 0.139±0.00
ENSG00000223598 ENST00000415477 N/A 0.049±0.00 N/A N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A 0.146±0.00 N/A 1.092±0.30
ENSG00000231883 ENST00000431947 N/A N/A N/A N/A 0.022±0.00 N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A 0.767±0.00
ENSG00000232290 ENST00000445833 0.058±0.00 0.136±0.00 N/A N/A 0.361±0.00 N/A N/A N/A 0.023±0.00 N/A 0.025±0.00 0.617±0.27 N/A 0.025±0.00
ENSG00000252431 ENST00000516622 N/A 0.787±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252487 ENST00000516678 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.045±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038587 ENSMUST00000045730 6.497±2.84 1.972±0.24 28.954±16.73 9.688±3.87 4.155±1.11 3.008±0.35 3.262±1.74 2.403±0.85 0.655±0.53 11.498±3.51 0.765±0.57 5.126±1.47 2.628±1.34 118.011±0.00
ENSMUSG00000040675 ENSMUST00000043735 0.455±0.37 0.627±0.16 1.679±0.29 0.742±0.49 0.798±0.30 1.074±0.49 0.122±0.05 0.147±0.09 2.791±2.21 0.772±0.00 0.074±0.02 1.643±0.67 2.047±0.79 0.720±0.33
ENSMUST00000117291 0.547±0.44 N/A 4.512±0.24 1.355±0.31 0.736±0.47 0.607±0.19 0.161±0.03 0.261±0.11 10.280±6.05 0.609±0.16 0.151±0.05 1.957±0.95 8.185±4.07 0.487±0.29
ENSMUST00000120585 0.250±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.513±0.00 N/A 0.158±0.00
ENSMUST00000154517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.187±0.00 N/A 19.170±0.00 N/A
ENSMUSG00000065792 ENSMUST00000083858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.713±0.00 N/A
ENSMUSG00000082247 ENSMUST00000119524 N/A N/A 0.187±0.00 0.068±0.01 0.390±0.00 N/A N/A N/A 0.068±0.03 N/A N/A N/A 0.108±0.05 0.112±0.03

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