C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404600 RP11-157J24.1-001 ENSG00000218027 9606 - 6:1513698-1515289 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLungOvaryPlacentaTestisENST00000404600
Transcript ID Adrenal Brain Heart Lung Ovary Placenta Testis
ENST00000404600 0.017±0.00 0.017±0.00 0.042±0.00 0.123±0.00 0.046±0.01 0.019±0.01 0.169±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038B CIL_00038B_0001 CGP 6:1389834-1613897

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108053 Elf2-003 protein_coding Mus_musculus 0 1624
ENSMUST00000163748 Elf2-201 protein_coding Mus_musculus 0 1548
ENSMUST00000183463 Elf2-006 nonsense_mediated_decay Mus_musculus 0 1546
ENSMUST00000108051 Elf2-004 protein_coding Mus_musculus 0 1345
ENSMUST00000062009 Elf2-002 protein_coding Mus_musculus 0 1345
ENSMUST00000091144 Elf2-001 protein_coding Mus_musculus 0 1127
ENSMUST00000156983 Elf2-008 retained_intron Mus_musculus 0 233
ENSMUST00000184677 Elf2-007 nonsense_mediated_decay Mus_musculus 0 233
ENSMUST00000183338 Elf2-005 nonsense_mediated_decay Mus_musculus 2e-36 158

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