C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E74-like factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163748 Elf2-201 ENSMUSG00000037174 10090 - 3:51255685-51325987 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000163748
Transcript ID Adipose Bladder Brain Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000163748 2.610±0.22 3.195±0.58 6.985±0.81 3.175±0.01 1.592±0.18 6.070±2.60 2.092±0.31 19.950±7.83 16.529±10.87 25.738±13.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YJ CIL_0006YJ_0003 CGP 3:51224447-51340658
CIL_00001P CIL_00001P_0002 CGP 3:51255665-51396738

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IBA nucleus
GO:0006357 ISS regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0030154 IBA cell differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0045893 ISS positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358635 ELF2-002 protein_coding Homo_sapiens 0 2508
ENST00000379549 ELF2-201 protein_coding Homo_sapiens 0 1978
ENST00000379550 ELF2-202 protein_coding Homo_sapiens 0 2854
ENST00000394235 ELF2-001 protein_coding Homo_sapiens 0 2261
ENST00000404600 RP11-157J24.1-001 processed_pseudogene Homo_sapiens 0 1548
ENST00000414888 AC080125.1-001 processed_pseudogene Homo_sapiens 0 684
ENST00000420916 ELF2-009 protein_coding Homo_sapiens 0 551
ENST00000445099 XXyac-YM21GA2.1-001 processed_pseudogene Homo_sapiens 0 1142
ENST00000504314 ELF2-010 retained_intron Homo_sapiens 0 531
ENST00000510408 ELF2-006 protein_coding Homo_sapiens 0 1838
ENST00000511006 ELF2-003 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000511184 ELF2-004 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000512627 ELF2-008 protein_coding Homo_sapiens 0 411
ENST00000514577 ELF2-011 retained_intron Homo_sapiens 0 571
ENST00000514606 ELF2-005 retained_intron Homo_sapiens 0 196

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