C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E74-like factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062009 Elf2-002 ENSMUSG00000037174 10090 - 3:51255665-51340644 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062009
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062009 6.231±2.71 5.085±0.00 5.326±0.81 4.875±1.11 3.912±0.00 4.601±0.30 2.428±0.32 6.703±2.01 7.129±1.52 1.985±0.46 7.878±3.01 6.396±0.20 21.044±6.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YJ CIL_0006YJ_0003 CGP 3:51224447-51340658
CIL_00001P CIL_00001P_0002 CGP 3:51255665-51396738

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IBA nucleus
GO:0006357 ISS regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0030154 IBA cell differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0045893 ISS positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000103383 elf2b-202 protein_coding Danio_rerio 5e-26 124
ENSDART00000011414 elf2b-201 protein_coding Danio_rerio 5e-26 124
ENST00000358635 ELF2-002 protein_coding Homo_sapiens 0 2634
ENST00000379549 ELF2-201 protein_coding Homo_sapiens 0 2351
ENST00000379550 ELF2-202 protein_coding Homo_sapiens 0 2634
ENST00000394235 ELF2-001 protein_coding Homo_sapiens 0 3208
ENST00000404600 RP11-157J24.1-001 processed_pseudogene Homo_sapiens 0 1345
ENST00000414888 AC080125.1-001 processed_pseudogene Homo_sapiens 0 684
ENST00000420916 ELF2-009 protein_coding Homo_sapiens 0 551
ENST00000445099 XXyac-YM21GA2.1-001 processed_pseudogene Homo_sapiens 0 1234
ENST00000504314 ELF2-010 retained_intron Homo_sapiens 0 477
ENST00000510408 ELF2-006 protein_coding Homo_sapiens 0 2030
ENST00000511006 ELF2-003 retained_intron Homo_sapiens 0 224
ENST00000511184 ELF2-004 nonsense_mediated_decay Homo_sapiens 0 390
ENST00000512627 ELF2-008 protein_coding Homo_sapiens 0 411
ENST00000514577 ELF2-011 retained_intron Homo_sapiens 0 767
ENST00000514606 ELF2-005 retained_intron Homo_sapiens 0 486

Loading