C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E74-like factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183338 Elf2-005 ENSMUSG00000037174 10090 - 3:51264869-51340658 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryTestisENSMUST00000183338
Transcript ID Colon Ovary Testis
ENSMUST00000183338 7.668±0.00 14.148±0.00 53.976±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006YJ CIL_0006YJ_0003 CGP 3:51224447-51340658
CIL_00001P CIL_00001P_0002 CGP 3:51255665-51396738

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0030154 IBA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358635 ELF2-002 protein_coding Homo_sapiens 0 196
ENST00000379549 ELF2-201 protein_coding Homo_sapiens 0 196
ENST00000379550 ELF2-202 protein_coding Homo_sapiens 0 364
ENST00000394235 ELF2-001 protein_coding Homo_sapiens 0 387
ENST00000404600 RP11-157J24.1-001 processed_pseudogene Homo_sapiens 2e-36 158
ENST00000420916 ELF2-009 protein_coding Homo_sapiens 0 196
ENST00000510408 ELF2-006 protein_coding Homo_sapiens 0 355
ENST00000511006 ELF2-003 retained_intron Homo_sapiens 0 224
ENST00000511184 ELF2-004 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000512627 ELF2-008 protein_coding Homo_sapiens 0 355
ENST00000514577 ELF2-011 retained_intron Homo_sapiens 0 355
ENST00000514606 ELF2-005 retained_intron Homo_sapiens 0 355

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