C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | methyl-CpG binding domain protein 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000404807  |
MBD5-004 |
ENSG00000204406 |
9606 | + |
2:148458630-148513451  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006MB | CIL_0006MB_0001 | CGP | 2:147844517-148021604 |
| CIL_0006MC | CIL_0006MC_0001 | CGP | 2:147930397-148518236 |
| CIL_000210 | CIL_000210_0001 | CGP | 2:148021011-148787568 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IEA | nucleus |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000047413
|
Mbd5-001 | protein_coding | Mus_musculus | 0 | 8419 |
|
ENSMUST00000122841
|
Mbd5-002 | protein_coding | Mus_musculus | 0 | 4737 |
|
ENSMUST00000112754
|
Mbd5-003 | protein_coding | Mus_musculus | 0 | 4625 |
|
ENSMUST00000112745
|
Mbd5-005 | protein_coding | Mus_musculus | 0 | 4137 |
|
ENSMUST00000132717
|
Mbd5-006 | nonsense_mediated_decay | Mus_musculus | 0 | 1690 |
|
ENSDART00000082954
|
mbd5-201 | protein_coding | Danio_rerio | 5e-18 | 99 |
