C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000210_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204406-ENSG00000135999 CGP 9606 2:148021011-148787568
GeneTranscriptPositionBiotype
ENSG00000135999 (EPC2)
enhancer of polycomb homolog 2 (Drosophila) 		ENST00000258484 (EPC2-001) 148644984-148787568 protein_coding
ENST00000397424 (EPC2-002) 148645420-148761809 protein_coding
ENST00000409654 (EPC2-003) 148644999-148692833 protein_coding
ENST00000449013 (EPC2-004) 148690214-148692248 protein_coding
ENST00000457184 (EPC2-006) 148644440-148754020 protein_coding
ENST00000491099 (EPC2-005) 148753895-148762215 retained_intron
ENSG00000212181 (SNORA48)
Small nucleolar RNA SNORA48 		ENST00000390879 (SNORA48.1-201) 148260574-148260708 snoRNA
ENSG00000224007 (AC019070.1)
 ENST00000415008 (AC019070.1-001) 148295656-148296679 processed_pseudogene
ENSG00000232238 (AC017080.1)
 ENST00000445109 (AC017080.1-001) 148595158-148595328 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_000210_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036792-ENSMUSG00000069495 CGP 10090 2:48949510-49551948
GeneTranscriptPositionBiotype
ENSMUSG00000026761 (Orc4)
origin recognition complex, subunit 4 		ENSMUST00000028098 (Orc4-001) 48902824-48949276 protein_coding
ENSMUST00000090976 (Orc4-002) 48931958-48949234 protein_coding
ENSMUST00000123271 (Orc4-005) 48936844-48950277 protein_coding
ENSMUST00000123789 (Orc4-009) 48929626-48940365 processed_transcript
ENSMUST00000123809 (Orc4-007) 48936477-48949232 processed_transcript
ENSMUST00000128618 (Orc4-012) 48905414-48912575 processed_transcript
ENSMUST00000141441 (Orc4-003) 48911404-48949234 processed_transcript
ENSMUST00000142851 (Orc4-008) 48917205-48950039 protein_coding
ENSMUST00000149679 (Orc4-006) 48936773-48949241 protein_coding
ENSMUST00000150492 (Orc4-011) 48905379-48910668 processed_transcript
ENSMUST00000153150 (Orc4-010) 48933153-48934202 processed_transcript
ENSMUST00000154784 (Orc4-004) 48905316-48949231 processed_transcript
ENSMUST00000156956 (Orc4-013) 48904880-48910013 processed_transcript
ENSMUSG00000036792 (Mbd5)
methyl-CpG binding domain protein 5 		ENSMUST00000047413 (Mbd5-001) 49245969-49317069 protein_coding
ENSMUST00000112745 (Mbd5-005) 48949510-49260139 protein_coding
ENSMUST00000112754 (Mbd5-003) 49245812-49316972 protein_coding
ENSMUST00000122841 (Mbd5-002) 49256561-49316998 protein_coding
ENSMUST00000127085 (Mbd5-004) 48949510-49245737 processed_transcript
ENSMUST00000132717 (Mbd5-006) 49272184-49322284 nonsense_mediated_decay
ENSMUST00000142250 (Mbd5-009) 48949962-49021440 processed_transcript
ENSMUST00000147023 (Mbd5-011) 48950149-49065517 processed_transcript
ENSMUST00000147055 (Mbd5-007) 48950143-49245557 processed_transcript
ENSMUST00000148796 (Mbd5-010) 48949963-48954067 processed_transcript
ENSMUST00000154653 (Mbd5-008) 48949518-49119012 processed_transcript
ENSMUSG00000069495 (Epc2)
enhancer of polycomb homolog 2 (Drosophila) 		ENSMUST00000092123 (Epc2-001) 49451486-49551948 protein_coding
ENSMUST00000152485 (Epc2-002) 49528875-49537081 protein_coding
ENSMUSG00000080937 (Gm13510)
predicted gene 13510 		ENSMUST00000118659 (Gm13510-001) 49185018-49185446 processed_pseudogene
ENSMUSG00000081272 (Gm13509)
predicted gene 13509 		ENSMUST00000119733 (Gm13509-001) 49308155-49309462 processed_pseudogene
ENSMUSG00000084177 (Gm13508)
predicted gene 13508 		ENSMUST00000121639 (Gm13508-001) 49327377-49328151 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000210_0001ENSG00000135999ENST00000258484ENST00000397424ENST00000409654ENST00000449013ENST00000457184ENST00000491099ENSG00000212181ENST00000390879ENSG00000224007ENST00000415008ENSG00000232238ENST00000445109CIL_000210_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000210_0001ENSG00000135999ENST00000258484ENST00000409654ENST00000457184ENST00000491099ENSG00000212181ENST00000390879ENSG00000224007ENST00000415008ENSG00000232238ENST00000445109CIL_000210_0002ENSMUSG00000026761ENSMUST00000028098ENSMUST00000141441ENSMUST00000142851ENSMUST00000154784ENSMUSG00000036792ENSMUST00000047413ENSMUST00000112745ENSMUST00000112754ENSMUST00000122841ENSMUST00000148796ENSMUSG00000069495ENSMUST00000092123ENSMUSG00000080937ENSMUST00000118659ENSMUSG00000081272ENSMUST00000119733ENSMUSG00000084177ENSMUST00000121639
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135999 ENST00000258484 2.278±0.00 3.040±0.00 N/A 2.803±0.93 3.104±0.07 2.426±0.58 2.667±1.78 2.107±0.43 1.650±1.13 1.751±0.59 1.509±0.47 3.943±1.30 3.740±2.05 6.666±0.82
ENST00000397424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409654 1.249±0.00 N/A N/A N/A 3.579±0.00 3.460±0.00 1.536±0.00 2.351±0.00 N/A 3.358±1.46 N/A 3.328±0.00 1.311±0.10 N/A
ENST00000449013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.271±0.00 N/A N/A N/A
ENST00000491099 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.405±0.00 N/A N/A N/A N/A
ENSG00000212181 ENST00000390879 N/A N/A 8.680±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.637±0.00 N/A
ENSG00000224007 ENST00000415008 0.009±0.00 0.035±0.00 0.246±0.00 0.047±0.04 0.141±0.00 0.187±0.12 0.042±0.01 N/A 0.206±0.00 0.343±0.31 N/A 0.019±0.00 N/A 0.008±0.00
ENSG00000232238 ENST00000445109 0.119±0.00 0.120±0.00 N/A N/A N/A 0.113±0.00 N/A N/A N/A 0.440±0.00 0.836±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026761 ENSMUST00000028098 3.811±0.50 N/A 7.881±0.77 16.595±3.03 2.869±0.17 N/A 3.117±0.25 2.996±0.67 3.992±1.88 5.084±0.77 2.730±0.17 5.257±0.05 6.657±2.43 N/A
ENSMUST00000090976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141441 N/A N/A N/A 15.833±0.00 N/A N/A N/A N/A 4.929±0.00 N/A N/A 13.896±5.90 N/A N/A
ENSMUST00000142851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.429±1.58 N/A
ENSMUST00000149679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.556±2.64 N/A
ENSMUST00000156956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000036792 ENSMUST00000047413 1.674±0.10 N/A N/A N/A 1.172±0.18 1.350±0.00 N/A 1.374±0.26 0.573±0.00 1.313±0.00 N/A 1.233±0.09 N/A 0.843±0.00
ENSMUST00000112745 2.874±0.00 N/A N/A N/A 2.262±0.00 N/A 1.653±0.00 1.155±0.00 1.746±0.33 N/A N/A 2.352±0.61 2.439±0.00 N/A
ENSMUST00000112754 N/A N/A N/A 7.318±0.00 1.594±0.13 N/A N/A N/A N/A N/A N/A 3.727±0.38 N/A 1.593±0.33
ENSMUST00000122841 N/A N/A N/A N/A N/A N/A N/A 1.354±0.20 N/A N/A N/A N/A N/A 2.422±0.53
ENSMUST00000127085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148796 N/A 20.226±1.95 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000069495 ENSMUST00000092123 3.154±1.26 0.634±0.11 4.802±0.66 8.169±0.72 2.414±0.91 1.529±0.92 1.878±0.43 2.337±0.33 2.663±1.48 5.531±1.67 2.151±0.54 3.671±2.32 8.057±1.58 3.139±0.76
ENSMUST00000152485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000080937 ENSMUST00000118659 0.318±0.11 0.492±0.18 0.291±0.05 0.448±0.07 0.273±0.02 0.412±0.13 0.213±0.00 0.283±0.25 0.093±0.05 0.303±0.10 N/A 0.149±0.00 0.252±0.01 0.268±0.11
ENSMUSG00000081272 ENSMUST00000119733 9.554±0.97 1.859±0.44 2.980±0.97 11.726±5.71 6.467±1.15 3.767±0.85 3.521±0.56 6.026±1.68 5.664±4.30 5.833±0.32 0.273±0.15 10.274±7.55 1.792±2.21 1.428±0.53
ENSMUSG00000084177 ENSMUST00000121639 0.094±0.03 N/A N/A 0.056±0.02 N/A N/A N/A N/A 0.105±0.00 N/A N/A 0.034±0.00 N/A 0.074±0.00

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