C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: estrogen-related receptor alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405666 ESRRA-003 ENSG00000173153 9606 + 11:64306227-64316743 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000405666
Transcript ID Muscle
ENST00000405666 3.025±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 TAS DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0004879 TAS ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005496 IEA steroid binding
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IDA nucleolus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IMP:IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression
GO:0015630 IDA microtubule cytoskeleton
GO:0019904 IPI protein domain specific binding
GO:0030278 IEA regulation of ossification
GO:0030522 TAS intracellular receptor signaling pathway
GO:0042127 IEA regulation of cell proliferation
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IDA:IEA sequence-specific DNA binding
GO:0045171 IDA intercellular bridge
GO:0045667 IEA regulation of osteoblast differentiation
GO:0045670 IEA regulation of osteoclast differentiation
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0051216 IEA cartilage development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025906 Esrra-001 protein_coding Mus_musculus 0 2586
ENSMUST00000173635 Esrra-005 protein_coding Mus_musculus 0 824
ENSMUST00000173308 Esrra-004 processed_transcript Mus_musculus 0 483
ENSMUST00000145192 Esrra-003 retained_intron Mus_musculus 0 470
ENSMUST00000172975 Esrra-002 protein_coding Mus_musculus 0 440
ENSDART00000007600 esrrb-201 protein_coding Danio_rerio 0 252
ENSMUST00000088257 Trmt112-001 protein_coding Mus_musculus 1e-19 102

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