C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: estrogen related receptor, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025906 Esrra-001 ENSMUSG00000024955 10090 - 19:6910977-6921808 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025906
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025906 18.642±3.52 24.988±7.86 27.192±8.84 12.836±1.29 26.569±3.15 87.421±12.83 44.398±4.11 55.493±2.58 12.180±2.12 16.008±2.04 35.357±11.28 16.313±1.11 16.279±1.34 7.136±0.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005496 IEA steroid binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IEA nucleolus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISS regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0015630 IEA microtubule cytoskeleton
GO:0019904 IEA protein domain specific binding
GO:0030278 IEA regulation of ossification
GO:0042127 IEA regulation of cell proliferation
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA:ISS sequence-specific DNA binding
GO:0045171 IEA intercellular bridge
GO:0045667 IEA regulation of osteoblast differentiation
GO:0045670 IEA regulation of osteoclast differentiation
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051216 IEA cartilage development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000007600 esrrb-201 protein_coding Danio_rerio 0 243
ENST00000000442 ESRRA-002 protein_coding Homo_sapiens 0 2676
ENST00000400596 ESRRAP1-001 processed_pseudogene Homo_sapiens 0 1441
ENST00000405666 ESRRA-003 protein_coding Homo_sapiens 0 2586
ENST00000406310 ESRRA-001 protein_coding Homo_sapiens 0 2691
ENST00000418437 ESRRAP2-001 transcribed_processed_pseudogene Homo_sapiens 0 1435
ENST00000467987 ESRRA-005 retained_intron Homo_sapiens 0 357
ENST00000468670 ESRRA-004 protein_coding Homo_sapiens 0 468
ENST00000535750 TRMT112-004 protein_coding Homo_sapiens 0 385
ENST00000539594 ESRRA-007 protein_coding Homo_sapiens 0 824
ENST00000545035 ESRRA-006 protein_coding Homo_sapiens 0 795

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