C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Smith-Magenis syndrome chromosome region, candidate 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406438 SMCR8-001 ENSG00000176994 9606 + 17:18315310-18323203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000406438
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000406438 1.741±0.00 1.659±0.05 1.541±0.36 1.264±0.00 1.578±0.64 2.025±0.75 1.956±0.45 1.779±0.04 1.293±0.00 0.994±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00002B CIL_00002B_0002 CGP 17:18271428-18323203
CIL_00058O CIL_00058O_0002 CGP 17:18315310-18363563

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000056907 Smcr8-201 protein_coding Mus_musculus 0 3131
ENSMUST00000102667 Smcr8-001 protein_coding Mus_musculus 0 2582

Loading