C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: DNA (cytosine-5-)-methyltransferase 3 alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406659 DNMT3A-012 ENSG00000119772 9606 - 2:25281452-25342590 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENST00000406659
Transcript ID Adrenal
ENST00000406659 3.846±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JL CIL_0003JL_0002 CGP 2:25227855-25673647

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000791 IDA euchromatin
GO:0003677 IDA DNA binding
GO:0003886 IDA DNA (cytosine-5-)-methyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006306 IDA DNA methylation
GO:0006349 TAS regulation of gene expression by genetic imprinting
GO:0016363 IDA nuclear matrix
GO:0042802 IPI identical protein binding
GO:0046872 IEA metal ion binding
GO:0090116 IEA C-5 methylation of cytosine

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085826 Dnmt3a-003 retained_intron Mus_musculus 0 641
ENSMUST00000172719 Dnmt3a-017 protein_coding Mus_musculus 0 593
ENSMUST00000173700 Dnmt3a-002 retained_intron Mus_musculus 3e-34 152
ENSMUST00000020991 Dnmt3a-001 protein_coding Mus_musculus 0 518
ENSMUST00000174817 Dnmt3a-006 protein_coding Mus_musculus 0 518

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