C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 10B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407467 WNT10B-003 ENSG00000169884 9606 - 12:48965405-48971498 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLungPlacentaTestisENST00000407467
Transcript ID Brain Colon Kidney Lung Placenta Testis
ENST00000407467 0.533±0.00 0.100±0.00 0.098±0.00 0.517±0.00 0.240±0.00 2.107±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000G CIL_00000G_0001 CGP 12:48935723-48971763
CIL_00033L CIL_00033L_0002 CGP 12:48965340-48981676

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002062 IEP chondrocyte differentiation
GO:0005102 IEA receptor binding
GO:0005109 IBA frizzled binding
GO:0005576 TAS:IEA extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 NAS extracellular space
GO:0007275 IEA multicellular organismal development
GO:0016055 IMP:IEA Wnt signaling pathway
GO:0030182 ISS neuron differentiation
GO:0043065 IMP positive regulation of apoptotic process
GO:0045165 IBA cell fate commitment
GO:0045599 IDA negative regulation of fat cell differentiation
GO:0048018 IC receptor agonist activity
GO:0050821 IDA protein stabilization
GO:0060070 IDA canonical Wnt signaling pathway
GO:0071300 ISS cellular response to retinoic acid
GO:0071425 IDA hematopoietic stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023732 Wnt10b-201 protein_coding Mus_musculus 0 761
ENSMUST00000166022 Wnt10b-202 protein_coding Mus_musculus 0 725
ENSDART00000059974 wnt10b-001 protein_coding Danio_rerio 2e-32 145

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