C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAP1, GTP-GDP dissociation stimulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000408900 RAP1GDS1-005 ENSG00000138698 9606 + 4:98261518-98442334 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleENST00000408900
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle
ENST00000408900 1.531±0.00 3.856±0.00 11.282±0.00 2.206±0.39 2.340±0.00 1.932±0.00 2.185±0.00 3.834±0.00 0.437±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005C0 CIL_0005C0_0002 CGP 4:98261384-98658629

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000221 IEA vacuolar proton-transporting V-type ATPase, V1 domain
GO:0005096 NAS GTPase activator activity
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005783 IDA endoplasmic reticulum
GO:0005829 IDA cytosol
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0032471 IMP negative regulation of endoplasmic reticulum calcium ion concentration
GO:0046961 IEA proton-transporting ATPase activity, rotational mechanism
GO:0051561 IMP positive regulation of mitochondrial calcium ion concentration
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029796 Rap1gds1-201 protein_coding Mus_musculus 0 2259
ENSMUST00000098574 Rap1gds1-202 protein_coding Mus_musculus 0 1736

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