C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | COP9 signalosome subunit 7B | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000409091  |
COPS7B-023 |
ENSG00000144524 |
9606 | + |
2:231781685-231807695  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000899 | CIL_000899_0001 | VISTA | 2:231361987-231963495 |
| CIL_0007WD | CIL_0007WD_0001 | VISTA | 2:231362545-231967398 |
| CIL_0007FM | CIL_0007FM_0001 | CGP | 2:231706895-231786272 |
| CIL_0007FL | CIL_0007FL_0001 | CGP | 2:231732425-231809254 |
| CIL_0007FO | CIL_0007FO_0001 | CGP | 2:231781671-231926403 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005737 | IEA | cytoplasm |
| GO:0008180 | IDA | COP9 signalosome |
| GO:0010388 | IDA | cullin deneddylation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000027446
|
Cops7b-201 | protein_coding | Mus_musculus | 0 | 907 |
|
ENSMUST00000138280
|
Cops7b-003 | nonsense_mediated_decay | Mus_musculus | 0 | 907 |
|
ENSMUST00000121534
|
Cops7b-001 | protein_coding | Mus_musculus | 0 | 907 |
|
ENSMUST00000122884
|
Cops7b-002 | nonsense_mediated_decay | Mus_musculus | 0 | 767 |
|
ENSMUST00000127219
|
Cops7b-004 | processed_transcript | Mus_musculus | 0 | 263 |
|
ENSMUST00000149542
|
Cops7b-005 | protein_coding | Mus_musculus | 0.0000000000008 | 79 |
