C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protocadherin alpha 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409494 PCDHA13-002 ENSG00000239389 9606 + 5:140882208-141012344 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047614 Pcdha10-203 protein_coding Mus_musculus 0 2420
ENSMUST00000115658 Pcdha10-206 protein_coding Mus_musculus 0 2351
ENSMUST00000115659 Pcdha10-207 protein_coding Mus_musculus 0 2351
ENSMUST00000115657 Pcdha10-205 protein_coding Mus_musculus 0 2351
ENSMUST00000047479 Pcdha10-202 protein_coding Mus_musculus 0 2351
ENSMUST00000115662 Pcdha10-209 protein_coding Mus_musculus 0 2351
ENSMUST00000007584 Pcdha10-201 protein_coding Mus_musculus 0 2351
ENSMUST00000070797 Pcdha10-204 protein_coding Mus_musculus 0 2351
ENSMUST00000115661 Pcdha10-208 protein_coding Mus_musculus 0 490

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