C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphodiesterase 6D, cGMP-specific, rod, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409772 PDE6D-005 ENSG00000156973 9606 - 2:231732804-231781291 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000899 CIL_000899_0001 VISTA 2:231361987-231963495
CIL_0007WD CIL_0007WD_0001 VISTA 2:231362545-231967398
CIL_0007FM CIL_0007FM_0001 CGP 2:231706895-231786272
CIL_0007FL CIL_0007FL_0001 CGP 2:231732425-231809254

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146220 Pde6d-004 protein_coding Mus_musculus 0 588
ENSMUST00000148683 Pde6d-003 retained_intron Mus_musculus 0 588
ENSMUST00000027444 Pde6d-001 protein_coding Mus_musculus 0 588
ENSMUST00000143674 Pde6d-002 nonsense_mediated_decay Mus_musculus 0 394
ENSMUST00000150653 Pde6d-005 processed_transcript Mus_musculus 0 195

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