C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | phosphodiesterase 6D, cGMP-specific, rod, delta | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000148683  |
Pde6d-003 |
ENSMUSG00000026239 |
10090 | - |
1:86542994-86582547  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000899 | CIL_000899_0002 | VISTA | 1:86187174-86788752 |
| CIL_0007WD | CIL_0007WD_0002 | VISTA | 1:86187834-86792789 |
| CIL_0007FM | CIL_0007FM_0002 | CGP | 1:86526726-86582629 |
| CIL_0007FL | CIL_0007FL_0002 | CGP | 1:86542994-86609375 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000287600
|
PDE6D-001 | protein_coding | Homo_sapiens | 0 | 601 |
|
ENST00000409772
|
PDE6D-005 | protein_coding | Homo_sapiens | 0 | 588 |
|
ENST00000428104
|
PDE6D-004 | protein_coding | Homo_sapiens | 0 | 342 |
|
ENST00000477748
|
PDE6D-002 | processed_transcript | Homo_sapiens | 0 | 231 |
|
ENST00000486044
|
PDE6D-006 | retained_intron | Homo_sapiens | 0 | 558 |
