C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411837 RP5-882O7.4-001 ENSG00000232369 9606 - 1:44988234-44988725 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLiverMuscleENST00000411837
Transcript ID Adrenal Breast Liver Muscle
ENST00000411837 0.388±0.00 0.109±0.00 0.033±0.00 0.031±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 606
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 590
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 579
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 577
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 549
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 547
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 540
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 508
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 9.80909e-45 183
ENSMUST00000121392 Gm11761-001 processed_pseudogene Mus_musculus 0.000002 57

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