C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12842
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117298 Gm12842-001 ENSMUSG00000083507 10090 - 4:117825181-117825656 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverOvaryENSMUST00000117298
Transcript ID Liver Ovary
ENSMUST00000117298 0.092±0.08 0.127±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355968 PPIA-002 protein_coding Homo_sapiens 0 403
ENST00000358455 PPIAP22-001 processed_pseudogene Homo_sapiens 0 457
ENST00000369222 PPIAL4A-201 protein_coding Homo_sapiens 0 322
ENST00000377951 PPIAP26-001 processed_pseudogene Homo_sapiens 0 268
ENST00000395416 AC005522.6-001 processed_pseudogene Homo_sapiens 0 217
ENST00000403866 PPIAP9-001 processed_pseudogene Homo_sapiens 0 390
ENST00000405422 PPIAP31-001 processed_pseudogene Homo_sapiens 0 435
ENST00000411837 RP5-882O7.4-001 processed_pseudogene Homo_sapiens 0 357
ENST00000414143 PPIAP2-001 processed_pseudogene Homo_sapiens 0 363
ENST00000414949 PPIAP29-001 processed_pseudogene Homo_sapiens 0 429
ENST00000414951 RP11-5P22.1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000415933 PPIA-007 nonsense_mediated_decay Homo_sapiens 2e-33 147
ENST00000418291 PPIAP9-001 processed_pseudogene Homo_sapiens 0 390
ENST00000418508 AC019050.1-001 processed_pseudogene Homo_sapiens 0 359
ENST00000419275 PPIAL4G-001 protein_coding Homo_sapiens 0 337
ENST00000420447 PPIAP9-001 processed_pseudogene Homo_sapiens 0 385
ENST00000423991 RP11-804H8.5-001 processed_pseudogene Homo_sapiens 1e-30 135
ENST00000428657 AC073069.2-001 processed_pseudogene Homo_sapiens 0 265
ENST00000430535 RP11-316K19.3-001 processed_pseudogene Homo_sapiens 0 268
ENST00000433548 AC018463.5-001 processed_pseudogene Homo_sapiens 0 368
ENST00000434706 PPIAP13-001 processed_pseudogene Homo_sapiens 0 374
ENST00000438675 PPIAP10-001 processed_pseudogene Homo_sapiens 2e-26 122
ENST00000440658 PPIAP9-001 processed_pseudogene Homo_sapiens 0 390
ENST00000441480 RP11-214N16.2-001 processed_pseudogene Homo_sapiens 0 344
ENST00000442288 PPIAP9-001 processed_pseudogene Homo_sapiens 0 390
ENST00000443177 RP11-420H19.2-001 processed_pseudogene Homo_sapiens 0 193
ENST00000443254 PPIAP9-001 processed_pseudogene Homo_sapiens 0 390
ENST00000443635 PPIAP9-001 processed_pseudogene Homo_sapiens 0 379
ENST00000446082 RP3-347M6.1-001 processed_pseudogene Homo_sapiens 0 344
ENST00000447284 RP11-312J18.3-001 processed_pseudogene Homo_sapiens 0 303
ENST00000447554 PPIAP9-001 processed_pseudogene Homo_sapiens 0 390
ENST00000448832 PPIAP1-001 processed_pseudogene Homo_sapiens 0 305
ENST00000448870 AC090804.1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000450588 PPIAP3-001 processed_pseudogene Homo_sapiens 0 359
ENST00000452091 AC005517.3-001 processed_pseudogene Homo_sapiens 0 305
ENST00000452411 AC091654.7-001 processed_pseudogene Homo_sapiens 0 364
ENST00000455837 RP11-269M20.1-001 processed_pseudogene Homo_sapiens 0 267
ENST00000462517 PPIAP16-001 processed_pseudogene Homo_sapiens 0 292
ENST00000462678 RP4-545C24.5-001 processed_pseudogene Homo_sapiens 0 287
ENST00000464473 PPIAP21-001 processed_pseudogene Homo_sapiens 0 351
ENST00000468812 PPIA-001 protein_coding Homo_sapiens 0 457
ENST00000469748 RP11-440K22.1-001 processed_pseudogene Homo_sapiens 0 355
ENST00000480603 PPIA-008 processed_transcript Homo_sapiens 2e-33 147
ENST00000482002 AC005017.2-001 processed_pseudogene Homo_sapiens 0 394
ENST00000483456 RP11-641C17.1-001 processed_pseudogene Homo_sapiens 0 326
ENST00000487348 RP11-415K20.1-001 processed_pseudogene Homo_sapiens 0 350
ENST00000487390 RP11-651P23.2-001 processed_pseudogene Homo_sapiens 0 233
ENST00000489459 PPIA-003 protein_coding Homo_sapiens 0 398
ENST00000494484 PPIA-004 retained_intron Homo_sapiens 0 274
ENST00000510729 PPIAP11-001 processed_pseudogene Homo_sapiens 0 435
ENST00000519658 CTD-3107M8.2-001 processed_pseudogene Homo_sapiens 0 296
ENST00000527147 AP000620.1-001 processed_pseudogene Homo_sapiens 0 368
ENST00000530952 AP000662.9-001 processed_pseudogene Homo_sapiens 0 377
ENST00000544708 PPIAL4D-001 protein_coding Homo_sapiens 0 333
ENST00000550612 RP11-77I22.4-001 processed_pseudogene Homo_sapiens 0 220
ENST00000557078 PPIAP6-001 processed_pseudogene Homo_sapiens 0 375
ENST00000557282 RP11-481K9.4-001 processed_pseudogene Homo_sapiens 0 370
ENST00000567149 RP11-391L3.5-001 processed_pseudogene Homo_sapiens 0 351
ENST00000581138 PPIAL4F-001 protein_coding Homo_sapiens 0 339
ENST00000581164 PPIAL4F-001 protein_coding Homo_sapiens 0 339
ENST00000584068 PPIAL4C-201 protein_coding Homo_sapiens 0 326
ENST00000585245 PPIAL4C-001 protein_coding Homo_sapiens 0 348
ENST00000585753 CTC-448F2.3-001 processed_pseudogene Homo_sapiens 0 344
ENST00000606284 CTD-2501B8.5-001 processed_pseudogene Homo_sapiens 0 381
ENST00000620047 PPIA-201 protein_coding Homo_sapiens 0 372

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