C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PWP1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001836 Pwp1-001 ENSMUSG00000001785 10090 + 10:85871831-85889096 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001836
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001836 9.310±3.67 5.114±1.50 7.746±2.10 9.786±5.75 6.378±0.71 5.666±0.77 4.339±0.25 5.266±0.41 8.232±3.44 6.556±0.90 8.126±0.78 10.212±2.50 7.488±4.97 8.378±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ME CIL_0001ME_0002 CGP 10:85386814-85889096
CIL_0001MB CIL_0001MB_0002 CGP 10:85871831-85916945

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005730 IEA nucleolus
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000412830 PWP1-001 protein_coding Homo_sapiens 0 1609
ENST00000541166 PWP1-005 protein_coding Homo_sapiens 0 1502
ENST00000547120 PWP1-007 retained_intron Homo_sapiens 0 462
ENST00000552760 PWP1-003 nonsense_mediated_decay Homo_sapiens 0 383

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