C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: flotillin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413165 FLOT1-008 ENSG00000137312 9606 - 6:30730919-30742307 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverMuscleOvaryENST00000413165
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary
ENST00000413165 3.718±0.00 17.413±0.00 7.475±0.00 2.846±0.00 4.299±0.00 7.180±0.00 10.036±0.00 7.921±0.00 12.830±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0001 VISTA 6:30539989-31144784

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173628 Flot1-002 nonsense_mediated_decay Mus_musculus 0 904
ENSMUST00000001569 Flot1-001 protein_coding Mus_musculus 0 904
ENSMUST00000174080 Flot1-011 protein_coding Mus_musculus 0 712
ENSMUST00000173147 Flot1-006 protein_coding Mus_musculus 0 499
ENSMUST00000173493 Flot1-005 protein_coding Mus_musculus 0 483
ENSMUST00000172846 Flot1-003 protein_coding Mus_musculus 0 481
ENSMUST00000173337 Flot1-004 retained_intron Mus_musculus 0 340
ENSMUST00000174227 Flot1-007 retained_intron Mus_musculus 9e-18 95

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