C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | PALM2-AKAP2 readthrough | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000413420  |
PALM2-AKAP2-002 |
ENSG00000157654 |
9606 | + |
9:109780439-110136149  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001GE | CIL_0001GE_0001 | CGP | 9:109375466-109946703 |
| CIL_00016E | CIL_00016E_0001 | CGP | 9:109640788-110172512 |
| CIL_0007HX | CIL_0007HX_0001 | CGP | 9:109780309-110172512 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0008360 | IEA | regulation of cell shape |
| GO:0016020 | IEA | membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000126465
|
Palm2Akap2-003 | nonsense_mediated_decay | Mus_musculus | 0 | 1491 |
|
ENSMUST00000142556
|
Palm2-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1459 |
|
ENSMUST00000102904
|
Palm2-001 | protein_coding | Mus_musculus | 0 | 837 |
|
ENSMUST00000102905
|
Palm2-003 | protein_coding | Mus_musculus | 0 | 837 |
|
ENSMUST00000098066
|
Palm2Akap2-002 | nonsense_mediated_decay | Mus_musculus | 0 | 628 |
|
ENSMUST00000150412
|
Palm2Akap2-001 | protein_coding | Mus_musculus | 0 | 440 |
|
ENSMUST00000131201
|
Palm2-004 | retained_intron | Mus_musculus | 0 | 440 |
