C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neutrophil cytosolic factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000413720 NCF2-201 ENSG00000116701 9606 - 1:183555563-183590604 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartOvaryENST00000413720
Transcript ID Adipose Adrenal Brain Heart Ovary
ENST00000413720 2.027±0.00 1.541±0.00 0.256±0.05 0.736±0.00 0.586±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BJ CIL_0001BJ_0002 CGP 1:183248237-183598246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005515 IPI:IEA protein binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006801 TAS superoxide metabolic process
GO:0006968 TAS cellular defense response
GO:0008022 IPI protein C-terminus binding
GO:0009055 TAS electron carrier activity
GO:0032010 TAS phagolysosome
GO:0042554 TAS superoxide anion generation
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0043020 TAS NADPH oxidase complex
GO:0045087 TAS innate immune response
GO:0045730 TAS respiratory burst
GO:0051701 TAS interaction with host
GO:0090382 TAS phagosome maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027754 Ncf2-201 protein_coding Mus_musculus 0 996
ENSMUST00000186568 Ncf2-001 protein_coding Mus_musculus 0 996
ENSMUST00000122415 Gm9025-001 processed_pseudogene Mus_musculus 0 983

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