C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414066 RP11-162G10.1-001 ENSG00000228828 9606 - 10:37818606-37820982 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000414066
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000414066 0.015±0.00 0.157±0.00 0.719±0.00 0.369±0.00 0.450±0.36 0.893±0.00 0.164±0.13 0.269±0.24 0.274±0.23 0.159±0.00 0.457±0.54 0.094±0.00 0.241±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R3 CIL_0000R3_0001 CGP 10:37776526-37976633

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106941 Tlk2-006 protein_coding Mus_musculus 0 2684
ENSMUST00000092537 Tlk2-002 protein_coding Mus_musculus 0 2427
ENSMUST00000126175 Tlk2-003 nonsense_mediated_decay Mus_musculus 0 2187
ENSMUST00000015107 Tlk2-008 protein_coding Mus_musculus 0 2187
ENSMUST00000106939 Tlk2-001 protein_coding Mus_musculus 0 2187
ENSMUST00000145048 Tlk2-009 protein_coding Mus_musculus 0 1688
ENSMUST00000146910 Tlk2-007 processed_transcript Mus_musculus 0 784
ENSMUST00000152404 Tlk2-005 protein_coding Mus_musculus 0 673
ENSMUST00000121771 Gm13168-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000120042 Gm13240-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000120609 Gm13161-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000117481 Gm13243-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000149459 Tlk2-011 protein_coding Mus_musculus 0 370
ENSMUST00000121481 Gm13162-001 processed_pseudogene Mus_musculus 0 327

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