C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Rap guanine nucleotide exchange factor (GEF) 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000414781  |
RAPGEF1-006 |
ENSG00000107263 |
9606 | - |
9:131587736-131621838  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00088E | CIL_00088E_0001 | VISTA | 9:131030990-131632063 |
| CIL_0002EB | CIL_0002EB_0002 | CGP | 9:131576770-132079908 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005085 | IEA | guanyl-nucleotide exchange factor activity |
| GO:0005622 | IEA | intracellular |
| GO:0007264 | IEA | small GTPase mediated signal transduction |
| GO:0051056 | IEA | regulation of small GTPase mediated signal transduction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000091146
|
Rapgef1-004 | protein_coding | Mus_musculus | 0 | 1037 |
|
ENSMUST00000147488
|
Rapgef1-002 | protein_coding | Mus_musculus | 0 | 920 |
|
ENSMUST00000147755
|
Rapgef1-003 | nonsense_mediated_decay | Mus_musculus | 0 | 920 |
|
ENSMUST00000102872
|
Rapgef1-001 | protein_coding | Mus_musculus | 0 | 920 |
|
ENSMUST00000095087
|
Rapgef1-007 | protein_coding | Mus_musculus | 0 | 920 |
