C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonuclease P/MRP 30kDa subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414836 RPP30-006 ENSG00000148688 9606 + 10:90875558-90900766 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000414836
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000414836 2.925±0.00 8.276±0.00 4.406±0.00 7.523±0.00 4.897±0.00 3.401±0.00 7.820±0.00 2.716±0.00 5.105±0.00 2.880±0.00 4.300±0.02 5.743±0.00 15.754±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BY CIL_0008BY_0001 VISTA 10:90630264-91230917
CIL_0005UK CIL_0005UK_0001 CGP 10:90740823-90908553
CIL_0001IP CIL_0001IP_0001 CGP 10:90871716-90921276

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004540 IEA ribonuclease activity
GO:0008033 IEA tRNA processing
GO:0090501 IEA RNA phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025714 Rpp30-201 protein_coding Mus_musculus 0 538

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