C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 16-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414850 TRIM16L-014 ENSG00000108448 9606 + 17:18722119-18735427 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartLungMuscleTestisENST00000414850
Transcript ID Colon Heart Lung Muscle Testis
ENST00000414850 1.344±0.00 0.874±0.00 0.590±0.13 1.563±0.00 1.488±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DU CIL_0000DU_0001 CGP 17:18658429-18736118
CIL_0005CX CIL_0005CX_0001 CGP 17:18697998-18779349

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000128623 Trim16-005 processed_transcript Mus_musculus 0 628
ENSMUST00000108703 Trim16-002 protein_coding Mus_musculus 0 628
ENSMUST00000055006 Trim16-001 protein_coding Mus_musculus 0 628
ENSMUST00000072639 Trim16-004 protein_coding Mus_musculus 0 411

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