C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414951 RP11-5P22.1-001 ENSG00000234838 9606 + 5:66572057-66572546 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000414951
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000414951 0.486±0.00 0.140±0.02 0.069±0.00 0.207±0.00 0.265±0.00 0.034±0.00 0.244±0.17 0.033±0.00 0.163±0.00 0.138±0.02 0.140±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 616
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 593
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 575
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 562
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 556
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 555
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 532
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 510
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 283
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 267
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 0 222
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 6e-32 141

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