C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: thymosin beta 10 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415070 TMSB10P1-001 ENSG00000228499 9606 - 2:235882362-235882493 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainOvaryENST00000415070
Transcript ID Adipose Adrenal Brain Ovary
ENST00000415070 1.000±0.00 0.221±0.00 0.242±0.00 46.614±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003R3 CIL_0003R3_0001 CGP 2:234951973-236131800
CIL_0003RE CIL_0003RE_0001 CGP 2:235494089-236168369
CIL_0007U0 CIL_0007U0_0001 VISTA 2:235564814-236166052
CIL_0007RK CIL_0007RK_0001 VISTA 2:235753955-236356213
CIL_0007KS CIL_0007KS_0001 UCNEbase 2:235807704-236163112
CIL_0008K4 CIL_0008K4_0001 VISTA 2:235862720-236463204

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119949 Gm3788-001 processed_pseudogene Mus_musculus 8.99999e-40 165
ENSMUST00000114048 Tmsb10-003 protein_coding Mus_musculus 3e-39 163
ENSMUST00000114049 Tmsb10-002 protein_coding Mus_musculus 3e-39 163
ENSMUST00000114050 Tmsb10-001 protein_coding Mus_musculus 3e-39 163
ENSMUST00000144337 Tmsb10-004 retained_intron Mus_musculus 3e-34 147
ENSMUST00000178853 Gm8034-001 processed_pseudogene Mus_musculus 1e-33 145
ENSMUST00000120026 Gm13588-001 processed_pseudogene Mus_musculus 2e-31 137

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