C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase A (cyclophilin A) pseudogene 30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415473 PPIAP30-001 ENSG00000206448 9606 - 10:15154802-15155320 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryTestisENST00000415473
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Testis
ENST00000415473 0.237±0.00 0.436±0.00 1.047±0.00 0.203±0.08 1.097±0.00 0.813±0.00 0.113±0.00 0.514±0.22 0.588±0.37 0.460±0.40

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 440
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 418
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 418
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 411
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 411
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 390
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 372
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 329
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 311
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 263
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 254
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 0 195
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 2e-27 126

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