C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: general transcription factor IIIC, polypeptide 2, beta 110kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415683 GTF3C2-010 ENSG00000115207 9606 - 2:27327182-27329460 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000415683
Transcript ID Muscle
ENST00000415683 3.197±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DI CIL_0001DI_0001 CGP 2:27309492-27357034
CIL_0001DH CIL_0001DH_0001 CGP 2:27325849-27370486

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101411 GTF3C2-001 protein_coding Mus_musculus 0 575
ENSMUST00000043161 Gtf3c2-003 protein_coding Mus_musculus 0 575
ENSMUST00000088010 Gtf3c2-001 protein_coding Mus_musculus 0 575
ENSMUST00000144469 Gtf3c2-008 processed_transcript Mus_musculus 0 363
ENSMUST00000151370 Gtf3c2-004 retained_intron Mus_musculus 0 335
ENSMUST00000126745 Gtf3c2-009 retained_intron Mus_musculus 0 250

Loading