C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: general transcription factor IIIC, polypeptide 2, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043161 Gtf3c2-003 ENSMUSG00000029144 10090 - 5:31156788-31180117 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043161
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043161 16.893±1.24 27.277±2.55 16.621±2.82 13.484±1.58 19.139±2.31 17.532±2.29 10.787±0.96 14.102±1.75 9.890±2.98 18.737±1.27 5.384±0.55 22.188±4.60 11.573±4.22 10.433±4.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DI CIL_0001DI_0002 CGP 5:31140660-31179911
CIL_0001DH CIL_0001DH_0002 CGP 5:31156005-31193430

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264720 GTF3C2-201 protein_coding Homo_sapiens 0 3014
ENST00000359541 GTF3C2-001 protein_coding Homo_sapiens 0 3014
ENST00000410105 DACT3-003 protein_coding Homo_sapiens 0.000000002 69
ENST00000415683 GTF3C2-010 nonsense_mediated_decay Homo_sapiens 0 575
ENST00000419282 CD6-016 retained_intron Homo_sapiens 0.00000001 64
ENST00000423998 GTF3C2-002 protein_coding Homo_sapiens 0 292
ENST00000431028 GTF3C2-007 protein_coding Homo_sapiens 0 195
ENST00000449584 BRDT-007 protein_coding Homo_sapiens 0.000003 57
ENST00000454704 GTF3C2-009 protein_coding Homo_sapiens 0 1537
ENST00000457098 GTF3C2-012 protein_coding Homo_sapiens 0 407
ENST00000457748 GTF3C2-003 protein_coding Homo_sapiens 0 492
ENST00000459791 PLCD4-008 retained_intron Homo_sapiens 0.00002 57
ENST00000469493 PLCD4-003 retained_intron Homo_sapiens 0.00001 57
ENST00000470115 GTF3C2-005 retained_intron Homo_sapiens 0 403
ENST00000480989 GTF3C2-004 retained_intron Homo_sapiens 0 505
ENST00000493511 GTF3C2-011 retained_intron Homo_sapiens 0 479
ENST00000495298 GTF3C2-006 retained_intron Homo_sapiens 0 745
ENST00000622534 GTF3C2-202 protein_coding Homo_sapiens 0 1413

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