C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance complex component 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416905 MCM5-008 ENSG00000100297 9606 + 22:35400170-35406725 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverMuscleOvaryENST00000416905
Transcript ID Adipose Brain Breast Colon Kidney Liver Muscle Ovary
ENST00000416905 4.837±0.00 0.653±0.00 4.169±1.85 2.941±0.00 2.358±0.00 4.179±0.00 0.764±0.00 7.461±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099W CIL_00099W_0001 VISTA 22:35286634-35891311
CIL_00094Q CIL_00094Q_0001 VISTA 22:35329925-35944605
CIL_0006NI CIL_0006NI_0002 CGP 22:35380361-35425430
CIL_0003GR CIL_0003GR_0001 CGP 22:35400063-35554001

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003678 IEA DNA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006270 IEA DNA replication initiation
GO:0032508 IEA DNA duplex unwinding
GO:0042555 IEA MCM complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164309 Mcm5-201 protein_coding Mus_musculus 0 520

Loading