C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417100 RP11-483G21.3-001 ENSG00000225005 9606 + 7:73314107-73315213 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000417100
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000417100 0.291±0.00 0.432±0.00 0.258±0.00 0.218±0.00 0.163±0.00 0.108±0.00 0.063±0.00 0.140±0.00 0.031±0.00 0.064±0.03 0.187±0.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094754 Rpl7a-ps8-201 protein_coding Mus_musculus 0 387
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000121278 Gm13726-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000117439 Gm12385-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000187766 RP23-223O13.2-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000185009 Gm14214-001 translated_processed_pseudogene Mus_musculus 0 268
ENSMUST00000139800 Gm5353-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000117118 Rpl7a-ps9-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000119982 Gm15007-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000117903 Gm8097-001 processed_pseudogene Mus_musculus 0 195
ENSMUST00000184119 Gm27189-001 processed_pseudogene Mus_musculus 2e-20 104
ENSMUST00000119680 Gm15702-001 processed_pseudogene Mus_musculus 0.0000004 60

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