C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12385
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117439 Gm12385-001 ENSMUSG00000082302 10090 + 4:39767618-39768412 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000117439
Transcript ID Brain Testis
ENSMUST00000117439 0.017±0.01 0.056±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 553
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 429
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 577
ENST00000417100 RP11-483G21.3-001 processed_pseudogene Homo_sapiens 0 322
ENST00000417617 AC004129.9-001 processed_pseudogene Homo_sapiens 0 473
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 617
ENST00000435137 RP11-280O24.3-001 processed_pseudogene Homo_sapiens 0 532
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 484
ENST00000444758 RP11-508N12.3-001 processed_pseudogene Homo_sapiens 0 363
ENST00000444895 RP11-73E6.2-001 processed_pseudogene Homo_sapiens 0 475
ENST00000468834 RP11-462L8.2-001 processed_pseudogene Homo_sapiens 0 593
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 625
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 577
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 575
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 246
ENST00000480271 RP11-494M8.1-001 processed_pseudogene Homo_sapiens 0 368
ENST00000488538 RPL7AP26-001 processed_pseudogene Homo_sapiens 0 580
ENST00000494861 RP11-219G10.1-001 processed_pseudogene Homo_sapiens 0 473
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 424
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 348

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