C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ISY1-RAB43 readthrough
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418265 ISY1-RAB43-001 ENSG00000261796 9606 - 3:129087575-129161036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000418265
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000418265 1.871±0.00 4.421±0.00 0.854±0.00 1.144±0.75 1.656±0.22 1.601±0.06 0.854±0.53 2.121±0.07 1.898±1.11 2.747±1.62 6.065±1.48 4.801±0.46 3.627±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003B6 CIL_0003B6_0001 CGP 3:129060767-129122801
CIL_000311 CIL_000311_0001 CGP 3:129087569-129161036

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089497 Isy1-201 protein_coding Mus_musculus 0 1085
ENSMUST00000125377 Rab43-004 processed_transcript Mus_musculus 0 525
ENSMUST00000032134 Rab43-003 protein_coding Mus_musculus 0 525
ENSMUST00000078647 Rab43-001 protein_coding Mus_musculus 0 525
ENSDART00000093148 rab43-001 protein_coding Danio_rerio 0 444
ENSDART00000156205 rab43-002 retained_intron Danio_rerio 2e-36 159

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