C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ISY1 splicing factor homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089497 Isy1-201 ENSMUSG00000030056 10090 - 6:87818447-87838759 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089497
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089497 8.324±2.38 7.910±1.91 11.356±1.05 8.404±2.56 8.911±4.03 7.536±0.91 3.980±0.63 7.652±0.59 13.229±10.19 9.412±1.25 6.441±0.70 11.111±4.34 16.059±5.26 4.790±2.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000311 CIL_000311_0002 CGP 6:87788853-87838759
CIL_00007J CIL_00007J_0003 CGP 6:87818447-87851106

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005681 IEA spliceosomal complex
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273541 ISY1-004 protein_coding Homo_sapiens 0 534
ENST00000393292 ISY1-002 protein_coding Homo_sapiens 0 1075
ENST00000393295 ISY1-001 protein_coding Homo_sapiens 0 1094
ENST00000418265 ISY1-RAB43-001 protein_coding Homo_sapiens 0 1085
ENST00000485703 ISY1-003 nonsense_mediated_decay Homo_sapiens 0 514
ENST00000496163 ISY1-006 protein_coding Homo_sapiens 0 521

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