C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418508 AC019050.1-001 ENSG00000233428 9606 + 2:129496297-129496788 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLungMuscleOvaryTestisENST00000418508
Transcript ID Breast Heart Kidney Lung Muscle Ovary Testis
ENST00000418508 0.090±0.00 0.027±0.00 0.118±0.00 0.027±0.00 0.026±0.00 0.066±0.00 0.055±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 604
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 580
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 573
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 571
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 553
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 542
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 536
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 529
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 508
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 477
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000120045 Gm14534-001 processed_pseudogene Mus_musculus 2.8026e-45 185
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 1.99993e-41 172
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 1e-33 147

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