C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) III (DNA directed) polypeptide E (80kD)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418581 POLR3E-003 ENSG00000058600 9606 + 16:22297427-22334061 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000418581
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000418581 7.303±0.00 3.747±0.00 1.260±0.00 4.047±0.00 2.351±0.00 2.326±0.00 1.747±0.81 13.761±0.00 4.898±3.46 5.470±2.15 6.709±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005T8 CIL_0005T8_0001 CGP 16:22206282-22335103
CIL_0006GX CIL_0006GX_0001 CGP 16:22297375-22437165

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001056 IBA RNA polymerase III activity
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005634 IEA:IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005666 IBA DNA-directed RNA polymerase III complex
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006383 TAS transcription from RNA polymerase III promoter
GO:0006385 TAS transcription elongation from RNA polymerase III promoter
GO:0006386 TAS termination of RNA polymerase III transcription
GO:0010467 TAS gene expression
GO:0032481 TAS positive regulation of type I interferon production
GO:0045087 TAS innate immune response
GO:0051607 IEA defense response to virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033173 Polr3e-201 protein_coding Mus_musculus 0 2651
ENSMUST00000106483 Polr3e-202 protein_coding Mus_musculus 0 2617

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