C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methylthioadenosine phosphorylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419385 MTAP-006 ENSG00000099810 9606 + 9:21802657-21863286 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000419385
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000419385 1.928±0.00 1.940±0.00 1.482±0.00 1.678±0.00 2.038±0.00 1.867±0.16 0.661±0.20 1.206±0.33 1.883±0.82 1.672±0.44 0.608±0.00 4.778±2.23 2.825±1.07 1.425±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074E CIL_00074E_0001 CGP 9:21480839-21937651
CIL_0007YE CIL_0007YE_0001 VISTA 9:21773412-22380489
CIL_0007U7 CIL_0007U7_0001 VISTA 9:21778886-22382106
CIL_0007YH CIL_0007YH_0001 VISTA 9:21779916-22382548
CIL_0007YG CIL_0007YG_0001 VISTA 9:21783894-22389830
CIL_0007U8 CIL_0007U8_0001 VISTA 9:21787553-22389799
CIL_00095D CIL_00095D_0001 VISTA 9:21788649-22389830
CIL_000945 CIL_000945_0001 VISTA 9:21789705-22397955
CIL_0008WE CIL_0008WE_0001 VISTA 9:21797850-22401302
CIL_0007YC CIL_0007YC_0001 VISTA 9:21801286-22408086

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0009116 IEA nucleoside metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058030 Mtap-001 protein_coding Mus_musculus 0 929
ENSMUST00000119757 Gm4914-001 processed_pseudogene Mus_musculus 4.00001e-40 171

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