C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007YG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm373 VISTA 9606 9:21783894-22389830
GeneTranscriptPositionBiotype
ENSG00000099810 (MTAP)
methylthioadenosine phosphorylase 		ENST00000380172 (MTAP-001) 21802543-21867078 protein_coding
ENST00000419385 (MTAP-006) 21802657-21863286 nonsense_mediated_decay
ENST00000427788 (MTAP-013) 21803278-21837927 processed_transcript
ENST00000460874 (MTAP-003) 21802642-21862320 protein_coding
ENST00000484957 (MTAP-004) 21859323-21862220 processed_transcript
ENST00000577563 (MTAP-009) 21854724-21931199 protein_coding
ENST00000579422 (MTAP-012) 21802961-21818045 processed_transcript
ENST00000580675 (MTAP-011) 21802647-21815607 retained_intron
ENST00000580718 (MTAP-007) 21802662-21862367 nonsense_mediated_decay
ENST00000580900 (MTAP-008) 21802649-21937651 protein_coding
ENST00000581962 (MTAP-015) 21859220-21862092 retained_intron
ENST00000584988 (MTAP-014) 21856118-21862357 processed_transcript
ENST00000616982 (MTAP-010) 21930390-21932739 retained_intron
ENSG00000147883 (CDKN2B)
cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 		ENST00000276925 (CDKN2B-001) 22002903-22009363 protein_coding
ENST00000380142 (CDKN2B-002) 22005987-22009272 protein_coding
ENST00000579591 (CDKN2B-003) 22005203-22006271 retained_intron
ENSG00000215221 (UBA52P6)
ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 6 		ENST00000399822 (UBA52P6-001) 22012155-22012536 processed_pseudogene
ENSG00000224854 (C9orf53)
CDKN2A antisense RNA 1 (head to head) 		ENST00000441769 (C9orf53-001) 21966929-21967751 lincRNA
ENSG00000229298 (TUBB8P1)
tubulin beta 8 class VIII pseudogene 1 		ENST00000447235 (TUBB8P1-001) 21811621-21812347 processed_pseudogene
ENSG00000265194 (RP11-70L8.4)
 ENST00000581788 (RP11-70L8.4-001) 21858910-21861926 antisense
ENSG00000266446 (RP11-149I2.4)
 ENST00000578935 (RP11-149I2.4-001) 21995482-21996013 sense_intronic
ENSG00000277653 (CDKN2B-AS)
CDKN2B antisense RNA 1 intronic convserved region 		ENST00000617921 (CDKN2B-AS.1-201) 22117665-22117814 misc_RNA
ENSG00000279670 (RP11-70L8.5)
 ENST00000624779 (RP11-70L8.5-001) 21892188-21893857 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0007YG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm373 VISTA 10090 4:89099831-89706701
GeneTranscriptPositionBiotype
ENSMUSG00000043753 (Dmrta1)
doublesex and mab-3 related transcription factor like family A1 		ENSMUST00000052478 (Dmrta1-001) 89688198-89694772 protein_coding
ENSMUST00000131576 (Dmrta1-002) 89679436-89691919 processed_transcript
ENSMUSG00000044303 (Cdkn2a)
cyclin-dependent kinase inhibitor 2A 		ENSMUST00000060501 (Cdkn2a-001) 89274471-89282192 protein_coding
ENSMUST00000107131 (Cdkn2a-002) 89274541-89294653 protein_coding
ENSMUSG00000062937 (Mtap)
methylthioadenosine phosphorylase 		ENSMUST00000058030 (Mtap-001) 89137122-89181081 protein_coding
ENSMUST00000134429 (Mtap-002) 89176374-89179474 processed_transcript
ENSMUSG00000073802 (Cdkn2b)
cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 		ENSMUST00000097981 (Cdkn2b-201) 89306289-89311032 protein_coding
ENSMUSG00000080808 (Gm12608)
predicted gene 12608 		ENSMUST00000122013 (Gm12608-001) 89442217-89444644 processed_pseudogene
ENSMUSG00000083881 (Gm12605)
predicted gene 12605 		ENSMUST00000121213 (Gm12605-001) 89216864-89217816 unprocessed_pseudogene
ENSMUSG00000083989 (Gm12607)
predicted gene 12607 		ENSMUST00000120724 (Gm12607-001) 89161699-89162191 processed_pseudogene
ENSMUSG00000085147 (Gm12609)
predicted gene 12609 		ENSMUST00000129908 (Gm12609-001) 89381957-89399880 processed_transcript
ENSMUSG00000085569 (Gm12602)
predicted gene 12602 		ENSMUST00000138655 (Gm12602-002) 89123924-89128181 processed_transcript
ENSMUST00000154352 (Gm12602-001) 89100664-89128226 processed_transcript
ENSMUSG00000086035 (Gm12610)
predicted gene 12610 		ENSMUST00000139272 (Gm12610-001) 89421848-89463487 processed_transcript
ENSMUSG00000087659 (Gm12606)
predicted gene 12606 		ENSMUST00000127174 (Gm12606-002) 89235717-89273403 lincRNA
ENSMUST00000129527 (Gm12606-001) 89235699-89272587 lincRNA
ENSMUSG00000088504 (Gm26490)
predicted gene, 26490 		ENSMUST00000157879 (Gm26490-201) 89182981-89183120 snoRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007YG_0001ENSG00000099810ENST00000380172ENST00000419385ENST00000427788ENST00000460874ENST00000484957ENST00000577563ENST00000579422ENST00000580675ENST00000580718ENST00000580900ENST00000581962ENST00000584988ENST00000616982ENSG00000147883ENST00000276925ENST00000380142ENST00000579591ENSG00000215221ENST00000399822ENSG00000224854ENST00000441769ENSG00000229298ENST00000447235ENSG00000265194ENST00000581788ENSG00000266446ENST00000578935ENSG00000277653ENST00000617921ENSG00000279670ENST00000624779CIL_0007YG_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007YG_0001ENSG00000099810ENST00000380172ENST00000419385ENST00000460874ENST00000580718ENST00000580900ENST00000584988ENSG00000147883ENST00000276925ENST00000380142ENST00000579591ENSG00000215221ENST00000399822ENSG00000224854ENST00000441769ENSG00000229298ENST00000447235ENSG00000265194ENST00000581788ENSG00000266446ENST00000578935ENSG00000277653ENST00000617921ENSG00000279670ENST00000624779CIL_0007YG_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099810 ENST00000380172 1.530±0.00 0.865±0.00 0.809±0.00 1.190±0.00 1.046±0.48 1.239±0.06 0.421±0.05 1.268±0.32 1.646±0.61 0.461±0.00 0.275±0.00 2.280±0.15 1.480±0.07 0.953±0.43
ENST00000419385 1.928±0.00 1.940±0.00 1.482±0.00 1.678±0.00 2.038±0.00 1.867±0.16 0.661±0.20 1.206±0.33 1.883±0.82 1.672±0.44 0.608±0.00 4.778±2.23 2.825±1.07 1.425±0.00
ENST00000427788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460874 N/A N/A N/A N/A 2.830±0.00 N/A N/A 1.541±0.00 N/A N/A N/A N/A 3.628±0.58 3.349±0.00
ENST00000484957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580718 N/A N/A N/A N/A N/A N/A N/A N/A 2.074±0.00 N/A N/A N/A N/A N/A
ENST00000580900 1.199±0.00 1.022±0.00 N/A 0.299±0.00 1.369±0.00 0.530±0.00 0.211±0.06 0.445±0.16 0.631±0.21 0.548±0.06 0.376±0.00 0.981±0.28 0.638±0.12 0.439±0.00
ENST00000581962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584988 N/A N/A N/A N/A N/A N/A 1.799±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000616982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000147883 ENST00000276925 4.790±0.00 0.433±0.00 0.054±0.00 0.337±0.06 14.075±9.23 2.249±1.07 0.287±0.11 0.355±0.00 0.763±0.59 2.682±0.71 1.220±0.96 1.124±0.89 0.804±0.39 1.112±0.65
ENST00000380142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.252±0.00 N/A
ENST00000579591 5.945±0.00 0.776±0.00 N/A 0.909±0.00 43.133±0.00 2.971±1.12 0.488±0.00 N/A 1.659±1.49 10.181±0.00 3.738±0.00 5.661±5.36 1.216±0.70 10.047±0.00
ENSG00000215221 ENST00000399822 0.362±0.00 0.386±0.00 N/A 0.062±0.00 0.059±0.00 0.485±0.00 0.151±0.00 N/A 0.098±0.00 N/A 0.189±0.00 0.244±0.14 0.188±0.00 0.201±0.00
ENSG00000224854 ENST00000441769 N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A 0.112±0.00
ENSG00000229298 ENST00000447235 0.070±0.00 0.563±0.00 1.191±0.00 0.136±0.00 0.279±0.07 N/A 0.209±0.00 0.100±0.00 0.636±0.00 1.597±0.00 N/A 0.424±0.28 0.066±0.00 0.112±0.09
ENSG00000265194 ENST00000581788 N/A N/A N/A N/A 1.015±0.00 N/A N/A N/A N/A 2.156±0.00 N/A N/A N/A N/A
ENSG00000266446 ENST00000578935 0.366±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.822±0.04
ENSG00000277653 ENST00000617921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.269±0.00 N/A N/A
ENSG00000279670 ENST00000624779 0.005±0.00 0.192±0.00 0.728±0.00 0.063±0.02 0.311±0.25 0.348±0.34 0.032±0.01 0.276±0.17 0.654±0.00 0.573±0.56 0.042±0.00 0.329±0.28 0.217±0.20 0.127±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043753 ENSMUST00000052478 0.297±0.23 0.197±0.12 0.021±0.01 0.256±0.19 0.082±0.04 0.110±0.08 0.011±0.00 0.025±0.02 0.033±0.03 N/A 0.006±0.00 1.746±0.83 0.005±0.00 2.763±1.35
ENSMUST00000131576 N/A N/A 0.102±0.00 N/A 0.320±0.00 N/A 0.048±0.00 N/A N/A 0.089±0.00 N/A N/A 0.075±0.00 N/A
ENSMUSG00000044303 ENSMUST00000060501 1.374±0.42 2.542±0.30 0.316±0.10 0.013±0.00 1.618±0.82 0.262±0.12 0.134±0.01 0.068±0.04 0.068±0.03 3.109±1.51 0.175±0.07 0.537±0.22 4.031±1.80 1.384±0.16
ENSMUST00000107131 0.472±0.08 1.650±0.51 0.394±0.00 0.058±0.02 0.596±0.12 0.289±0.06 0.142±0.08 0.083±0.08 0.041±0.01 0.449±0.06 0.089±0.00 0.922±0.48 11.499±7.93 4.476±1.81
ENSMUSG00000062937 ENSMUST00000058030 7.352±0.25 4.101±0.56 14.069±0.42 3.537±1.05 4.642±1.36 1.234±0.21 4.464±0.52 6.314±0.57 5.899±2.59 2.890±0.19 4.214±0.42 7.984±3.06 7.267±3.86 1.060±0.29
ENSMUST00000134429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000073802 ENSMUST00000097981 8.787±4.62 9.189±2.96 5.872±1.57 0.381±0.23 8.753±4.62 80.067±5.35 0.370±0.15 3.078±0.64 0.076±0.03 34.219±2.90 0.784±0.14 20.537±7.23 1.646±0.62 3.881±0.53
ENSMUSG00000080808 ENSMUST00000122013 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A 0.007±0.00 0.065±0.00 N/A 0.083±0.02 0.014±0.00 N/A
ENSMUSG00000083881 ENSMUST00000121213 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.405±0.21
ENSMUSG00000083989 ENSMUST00000120724 0.132±0.01 N/A 0.056±0.01 0.173±0.00 0.146±0.00 N/A 0.104±0.00 0.150±0.00 0.201±0.13 0.166±0.00 N/A 0.082±0.00 0.049±0.00 N/A
ENSMUSG00000085147 ENSMUST00000129908 0.090±0.00 N/A 0.096±0.00 0.053±0.00 N/A 0.178±0.00 N/A N/A 0.015±0.00 N/A N/A 0.070±0.00 0.164±0.13 0.169±0.07
ENSMUSG00000085569 ENSMUST00000138655 0.140±0.00 N/A N/A N/A N/A N/A N/A N/A 0.177±0.16 0.181±0.00 N/A 0.266±0.00 N/A N/A
ENSMUST00000154352 N/A N/A 4.078±0.00 N/A N/A N/A N/A 0.075±0.00 0.215±0.15 N/A N/A 0.103±0.00 0.099±0.03 N/A
ENSMUSG00000086035 ENSMUST00000139272 0.164±0.05 N/A 0.016±0.00 0.034±0.00 0.087±0.00 N/A N/A N/A N/A 0.129±0.00 N/A 0.156±0.07 0.095±0.03 0.254±0.11
ENSMUSG00000087659 ENSMUST00000127174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.01 0.041±0.00
ENSMUST00000129527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00
ENSMUSG00000088504 ENSMUST00000157879 1378.390±0.00 N/A 5.429±0.00 N/A N/A N/A 1259.060±0.00 464.509±0.00 3.514±0.00 N/A 2.371±0.00 1831.730±0.00 1.463±0.00 N/A

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