C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | piezo-type mechanosensitive ion channel component 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000419505  |
PIEZO1-003 |
ENSG00000103335 |
9606 | - |
16:88715343-88719890  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00091T | CIL_00091T_0001 | VISTA | 16:88690989-89294615 |
| CIL_0000Y8 | CIL_0000Y8_0002 | CGP | 16:88696495-88715386 |
| CIL_0000Y5 | CIL_0000Y5_0002 | CGP | 16:88706463-88785211 |
| CIL_00057I | CIL_00057I_0002 | CGP | 16:88715343-88809258 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0008381 | IEA | mechanically-gated ion channel activity |
| GO:0016021 | IEA | integral component of membrane |
| GO:0034220 | IEA | ion transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000067252
|
Piezo1-201 | protein_coding | Mus_musculus | 0 | 833 |
|
ENSMUST00000128383
|
Piezo1-001 | nonsense_mediated_decay | Mus_musculus | 0 | 833 |
|
ENSMUST00000156333
|
Piezo1-003 | protein_coding | Mus_musculus | 0 | 833 |
|
ENSMUST00000126553
|
Piezo1-007 | retained_intron | Mus_musculus | 0 | 307 |
|
ENSDART00000113688
|
PIEZO2 (1 of 4)-201 | protein_coding | Danio_rerio | 0 | 279 |
|
ENSDART00000153654
|
PIEZO2 (1 of 4)-001 | protein_coding | Danio_rerio | 0 | 279 |
|
ENSMUST00000134304
|
Piezo1-006 | retained_intron | Mus_musculus | 0 | 265 |
|
ENSMUST00000151855
|
Ctu2-002 | nonsense_mediated_decay | Mus_musculus | 0 | 254 |
|
ENSMUST00000123671
|
Piezo1-008 | retained_intron | Mus_musculus | 0 | 254 |
|
ENSMUST00000116412
|
Ctu2-001 | protein_coding | Mus_musculus | 8e-21 | 106 |
