C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | cytosolic thiouridylase subunit 2 homolog (S. pombe) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000151855  |
Ctu2-002 |
ENSMUSG00000049482 |
10090 | + |
8:122476209-122484138  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00091T | CIL_00091T_0002 | VISTA | 8:122411841-123013825 |
| CIL_0000Y8 | CIL_0000Y8_0003 | CGP | 8:122466147-122484138 |
| CIL_0000Y5 | CIL_0000Y5_0003 | CGP | 8:122476143-122551329 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000049 | IEA | tRNA binding |
| GO:0002098 | IEA | tRNA wobble uridine modification |
| GO:0003674 | ND | molecular_function |
| GO:0005737 | IEA | cytoplasm |
| GO:0008150 | ND | biological_process |
| GO:0016779 | IEA | nucleotidyltransferase activity |
| GO:0032447 | IEA | protein urmylation |
| GO:0034227 | IEA | tRNA thio-modification |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000301015
|
PIEZO1-001 | protein_coding | Homo_sapiens | 0 | 254 |
|
ENST00000327397
|
PIEZO1-201 | protein_coding | Homo_sapiens | 0 | 254 |
|
ENST00000419505
|
PIEZO1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 254 |
|
ENST00000472168
|
PIEZO1-013 | retained_intron | Homo_sapiens | 3e-21 | 106 |
|
ENST00000484567
|
PIEZO1-004 | retained_intron | Homo_sapiens | 0 | 265 |
|
ENST00000495568
|
PIEZO1-010 | retained_intron | Homo_sapiens | 0 | 254 |
|
ENST00000518793
|
PIEZO1-015 | protein_coding | Homo_sapiens | 3e-21 | 106 |
