C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM and SH3 protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419929 LASP1-002 ENSG00000002834 9606 + 17:38873890-38915141 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryTestisENST00000419929
Transcript ID Bladder Brain Liver Ovary Testis
ENST00000419929 2.350±0.00 4.795±0.00 5.326±0.00 10.016±0.00 24.718±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QO CIL_0006QO_0001 CGP 17:38847865-38921770

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043843 Lasp1-001 protein_coding Mus_musculus 0 678
ENSMUST00000148280 Lasp1-011 protein_coding Mus_musculus 0 676
ENSMUST00000118257 Gm4875-001 processed_pseudogene Mus_musculus 0 656
ENSMUST00000129828 Lasp1-010 protein_coding Mus_musculus 0 532
ENSMUST00000152962 Lasp1-006 protein_coding Mus_musculus 0 481
ENSMUST00000129558 Lasp1-005 protein_coding Mus_musculus 0 479
ENSMUST00000146572 Lasp1-007 protein_coding Mus_musculus 0 440
ENSMUST00000155762 Lasp1-013 protein_coding Mus_musculus 0 283
ENSDART00000051807 lasp1-001 protein_coding Danio_rerio 0 268
ENSDART00000064838 lasp1-002 protein_coding Danio_rerio 0 267
ENSMUST00000107568 Lasp1-015 retained_intron Mus_musculus 0 265
ENSMUST00000127575 Lasp1-014 retained_intron Mus_musculus 0 265
ENSDART00000140376 lasp1-003 processed_transcript Danio_rerio 0 206

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