C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sodium channel, voltage-gated, type VII, alpha subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419992 SCN7A-002 ENSG00000136546 9606 - 2:166432321-166494247 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastKidneyLiverLungMuscleENST00000419992
Transcript ID Bladder Breast Kidney Liver Lung Muscle
ENST00000419992 0.124±0.00 1.437±0.00 0.290±0.00 2.766±0.00 7.762±0.00 0.271±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CV CIL_0006CV_0001 CGP 2:166195185-166494247

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001518 IEA voltage-gated sodium channel complex
GO:0005216 IEA ion channel activity
GO:0005248 IEA voltage-gated sodium channel activity
GO:0006811 IEA ion transport
GO:0006814 IEA sodium ion transport
GO:0006936 IEA muscle contraction
GO:0016020 IEA membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035725 IEA sodium ion transmembrane transport
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042792 Scn7a-001 protein_coding Mus_musculus 0 1633

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