C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SPEG complex locus | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000420132  |
SPEG-015 |
ENSG00000072195 |
9606 | + |
2:219442049-219444915  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000916 | CIL_000916_0001 | VISTA | 2:219106772-219707284 |
| CIL_0006O0 | CIL_0006O0_0001 | CGP | 2:219418377-219498287 |
| CIL_0006O1 | CIL_0006O1_0001 | CGP | 2:219434846-219506988 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000125306
|
Speg-012 | nonsense_mediated_decay | Mus_musculus | 0 | 340 |
|
ENSMUST00000148515
|
Speg-006 | protein_coding | Mus_musculus | 0 | 340 |
|
ENSMUST00000113590
|
Speg-002 | protein_coding | Mus_musculus | 0 | 287 |
|
ENSMUST00000087122
|
Speg-001 | protein_coding | Mus_musculus | 0 | 287 |
|
ENSMUST00000146705
|
Speg-005 | processed_transcript | Mus_musculus | 0 | 285 |
|
ENSMUST00000187214
|
Speg-015 | retained_intron | Mus_musculus | 0 | 206 |
|
ENSMUST00000125118
|
Speg-007 | retained_intron | Mus_musculus | 1e-35 | 154 |
|
ENSMUST00000132228
|
Speg-011 | nonsense_mediated_decay | Mus_musculus | 3e-35 | 152 |
